life science

x                                                 
 
 
journal abbreviation listjournal_abb.html

NeatMap: Non-clustered heatmap alternatives

http://cran.r-project.org/web/packages/NeatMap/index.html

NeatMap is a package to create heatmap like plots in 2 and 3 dimensions, without the need for cluster analysis. Like the heatmap, the plots created by NeatMap display both a dimensionally reduced representation of the data as well as the data itself. They are intended to be used in conjunction with dimensional reduction techniques such as PCA.

The original paper is BMC Bioinformatics 11, 45 (2010) http://www.biomedcentral.com/1471-2105/11/45

                http://www.biomedcentral.com/content/pdf/1471-2105-11-45.pdf  (PDF)


Related thesis: thesiscompress.pdf.tbz

Integrative Natural History Source

               

bio-physics manifesto BioPhys.pdf


              

Integrative Natural History

now in DropBox


 

        evolution

        ecology

        EvoDevo

        genetics

        origin, etc